These notes and tutorials deal with topics that we frequently encounter in our line of work but which are not systematically presented in the existing literature. Use them at your own risk.
Single-molecule vs. “Bulk” Chemistry, an Introduction. Click here
Some useful mathematical properties of master equations. Click here
Lecture notes on rate theory, transition state theory, and their connection to phenomenological chemical kinetics (from class CH382L: Statistical Mechanics). Click here
The kinetic Monte Carlo method, a Mathematica tutorial. Click here